CD BioSciences used root mean square deviation (RMSD) to describe the stability of the constructed biofilms. In bioinformatics, the root mean square deviation (RMSD) of atomic positions is a measure of the average distance between stacked protein atoms (usually backbone atoms). RMSD calculations can also be applied to non-protein molecules, such as small organic molecules. When studying the conformation of globular proteins, the similarity of the three-dimensional structure is usually measured by the RMSD of the Cα atomic coordinates after superimposing the best rigid bodies. Now, CD BioSciences provides you with a variety of stability test of biofilm system service to meet your research needs. 

Figure 1. The root mean square deviation (RMSD) plot of the systems during the 1 µs MD simulations. (Sugunadevi S, et al. 2018)

Our Services

CD BioSciences provides one-stop stability test of biofilm system service. We offer a variety of methods and software to choose from to meet your research needs.

Specific Biofilm Stability Test Approaches We Offer

CD BioSciences can provide you with a variety of stability test of biofilm system service using computer-aided methods to meet your scientific needs.

We can provide biofilm computer construction services, and the constructed biofilm needs to be tested for stability. CD BioSciences has established a professional biofilm stability testing service platform and can now provide you with professional stability calculation services.

You can tell us your computing needs based on your research needs, and our researchers will develop a customized service plan based on your project needs.

Confidentiality Statement

CD BioSciences has many business partners and knows the importance of confidentiality to these companies. We attach great importance to confidentiality, sign a confidentiality agreement before communicating with you, and adopt multiple firewalls and safeguards to protect your privacy.

Provided by Clients

Please inform us of your specific stability test of biofilm system service details, and we can provide customized solutions for different projects.

Service Process

Our Features

Deliverables

1. Related experimental results raw data
2. Biofilm molecular simulation results
3. Stability Assessment Report
4. Experimental report
5. Data analysis
6. Image and result analysis
7. Summary of relevant simulation parameters

Our Capabilities

CD BioSciences provides professional stability test of biofilm systems service to meet the scientific research needs of customers. CD BioSciences relies on world-class technical expertise, we provide customers with the highest quality one-stop biofilm-related services, including the development of experimental procedures according to different experimental needs. Please feel free to contact us for more details and our scientists will tailor the most reasonable plan for your project.

Reference

1. Sugunadevi S, Rebecca K, Bohu P, et al. Structural Changes Due to Antagonist Binding in Ligand Binding Pocket of Androgen Receptor Elucidated Through Molecular Dynamics Simulations. Frontiers in Pharmacology, 2018, 9:492.

• Biofilm Computational Construction Service
• Biofilm Molecular Dynamics Simulation Service
• RMSF Analysis of Biofilm System
• Gyration Radius Analysis of Biofilm System
• Binding Mode Analysis of Biofilm System
• Secondary Structure Analysis of Biofilm System
• Energy Analysis of Biofilm System
• Hydrophobic Interaction Analysis of Biofilm System
• Free Energy Landscape Analysis of Biofilm System
• Biofilm Conformational Principal Component Analysis
• Biofilm Ramachandran Plots Analysis
• Cluster Analysis of Biofilm System
• SAS Analysis Service of Biofilm System
• Energy Decomposition Analysis of Biofilm System
• Electrostatic Interaction Analysis of Biofilm System
• Biofilm Virtual Screening Service
• Computational Modeling of Early-Stage Biofilm Formation
• Biofilm CGMD Service
• Biofilm DPD Service
• Biofilm DEM Service
• Biofilm SPH Service
• Biofilm XFEM Service
• Other Biofilm MD Serivce
• Biofilm Homology Modeling Serivce
• Gram-negative Bacterial Outer Membrane Construction Service
• Biofilm Formation Simulation Service
• Construction Services for Discrete Difference Models
• Modeling Services for Geometric Heterogeneity in Biofilms
• Computational Simulation Service for Biofilm Development
• Computational Modeling Service for Synthetic Biofilms
• Biofilm MD Results Analysis Services
• Biofilm Multiscale Computational Modeling Service
• Biofilm Modeling Service