The relationship between the formation of biofilm and infectious diseases and its role in the occurrence, development and prognosis of the disease has become a research hotspot in recent years. Currently, we use computer-aided methods to provide biofilm secondary structure analysis services to help customers complete biofilm related research.

Our Services

CD BioSciences provides one-stop secondary structure analysis of biofilm system service. We offer a variety of methods and software to choose from to meet your research needs.

Specific Biofilm Secondary Structure Analysis Approaches We Offer

• The secondary structure of protein is mainly composed of α-helix, β-sheet, β-turn, etc. Different amino acid residues have specific effects on the tendency of protein secondary structure elements. Therefore, we provide professional secondary structure analysis services of biofilm structure.
• The most common parameters for determining protein structure are specifying secondary structure elements, such as alpha helices, beta sheets. We use the dssp program, which calculates the secondary structure for each frame in the trajectory. We generate de-jump trajectories listing the number of residues associated with each secondary structure type in each frame.
• We can also provide more detail, color-coding the secondary structure of each residue over time.
• We can use the GROMACS tool xpm2ps to add some useful metadata, and the results can be viewed with gview, or converted to pdf and viewed with xpdf or evine.

Provided by Clients

Please inform us of your specific secondary structure analysis of biofilm system service details, and we can provide customized solutions for different projects.

Service Process

Our Features

Deliverables

1. Related experimental results raw data
2. Secondary structure analysis of biofilm system results
3. Experimental report
4. Data analysis
5. Image and result analysis
6. Summary of relevant calculation parameters

Why Choose Us?

CD BioSciences' research team consists of seasoned PhD scientists and business managers with many years of experience. They have a professional technical level and can meet your various scientific research needs. CD BioSciences has professional R&D laboratories and high-end equipment to provide you with one-stop biofilm secondary structure analysis services. Please feel free to contact us for more detailed information, our scientists will tailor the most reasonable plan for your project.

• Biofilm Computational Construction Service
• Biofilm Molecular Dynamics Simulation Service
• Stability Test of Biofilm System
• RMSF Analysis of Biofilm System
• Gyration Radius Analysis of Biofilm System
• Binding Mode Analysis of Biofilm System
• Energy Analysis of Biofilm System
• Hydrophobic Interaction Analysis of Biofilm System
• Free Energy Landscape Analysis of Biofilm System
• Biofilm Conformational Principal Component Analysis
• Biofilm Ramachandran Plots Analysis
• Cluster Analysis of Biofilm System
• SAS Analysis Service of Biofilm System
• Energy Decomposition Analysis of Biofilm System
• Electrostatic Interaction Analysis of Biofilm System
• Biofilm Virtual Screening Service
• Computational Modeling of Early-Stage Biofilm Formation
• Biofilm CGMD Service
• Biofilm DPD Service
• Biofilm DEM Service
• Biofilm SPH Service
• Biofilm XFEM Service
• Other Biofilm MD Serivce
• Biofilm Homology Modeling Serivce
• Gram-negative Bacterial Outer Membrane Construction Service
• Biofilm Formation Simulation Service
• Construction Services for Discrete Difference Models
• Modeling Services for Geometric Heterogeneity in Biofilms
• Computational Simulation Service for Biofilm Development
• Computational Modeling Service for Synthetic Biofilms
• Biofilm MD Results Analysis Services
• Biofilm Multiscale Computational Modeling Service
• Biofilm Modeling Service